2B9S date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand VO4 enzyme
note 2B9S is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceThe structure of the transition state of the heterodimeric topoisomerase I of Leishmania donovani as a vanadate complex with nicked DNA., Davies DR, Mushtaq A, Interthal H, Champoux JJ, Hol WG, J Mol Biol. 2006 Apr 7;357(4):1202-10. Epub 2006 Jan 26. PMID:16487540
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (2b9s.pdb1.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 2B9S
  • CSU: Contacts of Structural Units for 2B9S
  • Likely Quarternary Molecular Structure file(s) for 2B9S
  • Structure Factors (601 Kb)
  • Retrieve 2B9S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2B9S from S2C, [Save to disk]
  • Re-refined 2b9s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2B9S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2b9s] [2b9s_A] [2b9s_B] [2b9s_C] [2b9s_D] [2b9s_E]
  • SWISS-PROT database: [Q8WQM6] [Q9GPZ9]
  • Domain found in 2B9S: [TOPEUc ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science