2BAQ Transferase date Oct 14, 2005
title P38alpha Bound To Ro3201195
authors S.Gerhardt, R.A.Pauptit, J.Breed, J.Read, J.Tucker, R.A.Norman
compound source
Molecule: Mitogen-Activated Protein Kinase 14
Chain: A
Synonym: Map Kinase P38 Alpha
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mapk14, Csbp, Csbp1, Csbp2, Mxi2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell_line: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pt73.3
symmetry Space Group: P 21 21 21
R_factor 0.218 R_Free 0.296
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.759 74.718 76.929 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand CSS, PQB BindingDB enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePrevention of MKK6-Dependent Activation by Binding to p38alpha MAP Kinase., Sullivan JE, Holdgate GA, Campbell D, Timms D, Gerhardt S, Breed J, Breeze AL, Bermingham A, Pauptit RA, Norman RA, Embrey KJ, Read J, Vanscyoc WS, Ward WH, Biochemistry. 2005 Dec 20;44(50):16475-90. PMID:16342939
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (2baq.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 2BAQ
  • CSU: Contacts of Structural Units for 2BAQ
  • Likely Quarternary Molecular Structure file(s) for 2BAQ
  • Structure Factors (74 Kb)
  • Retrieve 2BAQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BAQ from S2C, [Save to disk]
  • Re-refined 2baq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BAQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BAQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BAQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2baq] [2baq_A]
  • SWISS-PROT database: [Q16539]
  • Domain organization of [MK14_HUMAN] by SWISSPFAM
  • Domain found in 2BAQ: [S_TKc ] by SMART
  • Other resources with information on 2BAQ
  • Community annotation for 2BAQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science