2BBM SOLUTION STRUCTURE OF A CALMODULIN-TARGET PEPTIDE COMPLEX BY MULTIDIMENSIONAL NMR date
authors Clore, G.M., Bax, A., Ikura, M., Gronenborn, A.M.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA enzyme
note 2BBM (Molecule of the Month:pdb44)is a representative structure
related structures by homologous chain: 1ZAC, 2BBN
Gene
Ontology
ChainFunctionProcessComponent
A
  • enzyme regulator activity


  • Primary referenceSolution structure of a calmodulin-target peptide complex by multidimensional NMR., Ikura M, Clore GM, Gronenborn AM, Zhu G, Klee CB, Bax A, Science 1992 May 1;256(5057):632-8. PMID:1585175
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (2bbm.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 2BBM
  • CSU: Contacts of Structural Units for 2BBM
  • Original NMR restraints for 2BBM from PDB
  • Retrieve 2BBM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BBM from S2C, [Save to disk]
  • View 2BBM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BBM
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2BBM, from MSDmotif at EBI
  • Genome occurence of 2BBM's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2bbma_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 2bbm from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bbm_B] [2bbm] [2bbm_A]
  • SWISS-PROT database: [P62152] [P07313]
  • Domain organization of [CALM_DROME] [MYLK2_RABIT] by SWISSPFAM
  • Domain found in 2BBM: [EFh ] by SMART
  • Other resources with information on 2BBM
  • Community annotation for 2BBM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 2BBM from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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