2BIL Transferase date Jan 22, 2005
title The Human Protein Kinase Pim1 In Complex With Its Consensus Pimtide
authors S.Knapp, J.Debreczeni, A.Bullock, F.Von Delft, M.Sundstrom, C.Arr A.Edwards, K.Guo
compound source
Molecule: Consensus Pim1 Peptide Pimtide
Chain: A
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Proto-Oncogene Serinethreonine-Protein Kinase Pi
Chain: B
Synonym: Pim1
Ec: 2.7.1.37
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P11-Toronto
symmetry Space Group: P 65
R_factor 0.192 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
98.100 98.100 80.040 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.55 Å
ligand BI1 BindingDB enzyme Transferase E.C.2.7.1.37 BRENDA
related structures by homologous chain: 1YI3
Gene
Ontology
ChainFunctionProcessComponent
B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (2bil.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 2BIL
  • CSU: Contacts of Structural Units for 2BIL
  • Likely Quarternary Molecular Structure file(s) for 2BIL
  • Structure Factors (194 Kb)
  • Retrieve 2BIL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BIL from S2C, [Save to disk]
  • Re-refined 2bil structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BIL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BIL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BIL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bil_A] [2bil] [2bil_B]
  • SWISS-PROT database: [P11309]
  • Domain organization of [PIM1_HUMAN] by SWISSPFAM
  • Domain found in 2BIL: [S_TKc ] by SMART
  • Other resources with information on 2BIL
  • Community annotation for 2BIL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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