2BJW Transcription date Feb 08, 2005
title Pspf Aaa Domain
authors M.Rappas, J.Schumacher, F.Beuron, H.Niwa, P.Bordes, S.Wigneshwera C.A.Keetch, C.V.Robinson, M.Buck, X.Zhang
compound source
Molecule: Psp Operon Transcriptional Activator
Chain: A
Fragment: Aaa Domain, Residues 1-265
Synonym: Pspf, Phage Shock Protein F
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 83333
Strain: K12
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834
Expression_system_plasmid: Pet28b Plus
symmetry Space Group: P 65
R_factor 0.180 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.695 113.695 39.277 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.75 Å
related structures by homologous chain: 2BJV
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural insights into the activity of enhancer-binding proteins., Rappas M, Schumacher J, Beuron F, Niwa H, Bordes P, Wigneshweraraj S, Keetch CA, Robinson CV, Buck M, Zhang X, Science. 2005 Mar 25;307(5717):1972-5. PMID:15790859
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (2bjw.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 2BJW
  • Likely Quarternary Molecular Structure file(s) for 2BJW
  • Structure Factors (203 Kb)
  • Retrieve 2BJW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BJW from S2C, [Save to disk]
  • Re-refined 2bjw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BJW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BJW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BJW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bjw_A] [2bjw]
  • SWISS-PROT database: [P37344]
  • Domain organization of [PSPF_ECOLI] by SWISSPFAM
  • Domain found in 2BJW: [AAA ] by SMART
  • Other resources with information on 2BJW
  • Community annotation for 2BJW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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