2BLW	Hydrolase	date	Mar 08, 2005
title	Trypsin After A High Dose X-Ray "Burn"
authors	M.H.Nanao, R.B.Ravelli
compound		source
Molecule: Trypsin Chain: A Synonym: Beta-Trypsin Ec: 3.4.21.4		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Organ: Pancreas
symmetry	Space Group: P 21 21 21	R_factor 0.107 R_Free 0.130
crystal cell	length a length b length c angle alpha angle beta angle gamma 54.162 58.253 66.582 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.2 Å
ligand	BEN, CA, GOL, SO4 BindingDB	enzyme	Hydrolase E.C.3.4.21.4 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Improving radiation-damage substructures for RIP., Nanao MH, Sheldrick GM, Ravelli RB, Acta Crystallogr D Biol Crystallogr. 2005 Sep;61(Pt 9):1227-37. Epub 2005, Aug 16. PMID:16131756

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk] Biological Unit Coordinates (2blw.pdb1.gz) 83 Kb LPC: Ligand-Protein Contacts for 2BLW CSU: Contacts of Structural Units for 2BLW Likely Quarternary Molecular Structure file(s) for 2BLW Structure Factors (938 Kb) Retrieve 2BLW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BLW from S2C, [Save to disk] Re-refined 2blw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2BLW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BLW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BLW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2blw_A] [2blw] SWISS-PROT database: [P00760] Domain organization of [TRY1_BOVIN] by SWISSPFAM Domain found in 2BLW: [Tryp_SPc ] by SMART

Other resources with information on 2BLW

Community annotation for 2BLW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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