2BMV	Apoflavodoxin from Helicobacter pylori	date
authors	Martinez-Julvez, M., Hermoso, J.A., Sancho, J., Perez-Dorado, I., Cremades, N., Bueno, M.
compound		source
symmetry		R_factor R_Free 0.288
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.11
ligand	BEN, CL	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Common conformational changes in flavodoxins induced by FMN and anion binding: The structure of Helicobacter pylori apoflavodoxin., Martinez-Julvez M, Cremades N, Bueno M, Perez-Dorado I, Maya C, Cuesta-Lopez S, Prada D, Falo F, Hermoso JA, Sancho J, Proteins. 2007 Jul 10;. PMID:17623845

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk] Biological Unit Coordinates (2bmv.pdb1.gz) 28 Kb LPC: Ligand-Protein Contacts for 2BMV CSU: Contacts of Structural Units for 2BMV Likely Quarternary Molecular Structure file(s) for 2BMV Structure Factors (61 Kb) Retrieve 2BMV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BMV from S2C, [Save to disk] Re-refined 2bmv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2BMV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BMV

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2BMV, from MSDmotif at EBI Fold representative 2bmv from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2bmv_A] [2bmv] SWISS-PROT database: [O25776] Domain organization of [FLAV_HELPY] by SWISSPFAM

Other resources with information on 2BMV

Community annotation for 2BMV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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