2BMV	Electron Transport	date	Mar 16, 2005
title	Apoflavodoxin From Helicobacter Pylori
authors	M.Martinez-Julvez, J.A.Hermoso, J.Sancho, I.Perez-Dorado, N.Crem M.Bueno
compound		source
Molecule: Flavodoxin Chain: A Engineered: Yes		Organism_scientific: Helicobacter Pylori Organism_taxid: 210 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a Other_details: The Gene That Was Expressed To Obtain The Pr Isolated From A Patient Infected With H.Pylori Sp.
symmetry	Space Group: P 21 21 21	R_factor 0.200 R_Free 0.288
crystal cell	length a length b length c angle alpha angle beta angle gamma 36.610 45.712 86.652 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.11 Å
ligand	BEN, CL	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Common conformational changes in flavodoxins induced by FMN and anion binding: The structure of Helicobacter pylori apoflavodoxin., Martinez-Julvez M, Cremades N, Bueno M, Perez-Dorado I, Maya C, Cuesta-Lopez S, Prada D, Falo F, Hermoso JA, Sancho J, Proteins. 2007 Jul 10;. PMID:17623845

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk] Biological Unit Coordinates (2bmv.pdb1.gz) 27 Kb LPC: Ligand-Protein Contacts for 2BMV CSU: Contacts of Structural Units for 2BMV Likely Quarternary Molecular Structure file(s) for 2BMV Structure Factors (61 Kb) Retrieve 2BMV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BMV from S2C, [Save to disk] Re-refined 2bmv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2BMV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BMV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BMV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2bmv_A] [2bmv] SWISS-PROT database: [O25776] Domain organization of [FLAV_HELPY] by SWISSPFAM

Other resources with information on 2BMV

Community annotation for 2BMV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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