2BSK Protein Transport date May 23, 2005
title Crystal Structure Of The Tim9 Tim10 Hexameric Complex
authors C.T.Webb, M.A.Gorman, M.Lazarus, M.T.Ryan, J.M.Gulbis
compound source
Molecule: Mitochondrial Import Inner Membrane Translocase Subunit Tim9 A;
Chain: A, C, E
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Origami De3 Plyss
Expression_system_plasmid: Pgex 4t2

Molecule: Mitochondrial Import Inner Membrane Translocase Subunit Tim10;
Chain: B, D, F
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Origami De3 Plyss
Expression_system_plasmid: Pgex 4t2
symmetry Space Group: P 41 21 2
R_factor 0.2679 R_Free 0.3193
crystal
cell
length a length b length c angle alpha angle beta angle gamma
107.430 107.430 110.588 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.3 Å
ligand MSE enzyme
note 2BSK is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, C, E


F, D, B


Primary referenceCrystal structure of the mitochondrial chaperone TIM9.10 reveals a six-bladed alpha-propeller., Webb CT, Gorman MA, Lazarou M, Ryan MT, Gulbis JM, Mol Cell. 2006 Jan 6;21(1):123-33. PMID:16387659
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (2bsk.pdb1.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 2BSK
  • CSU: Contacts of Structural Units for 2BSK
  • Likely Quarternary Molecular Structure file(s) for 2BSK
  • Retrieve 2BSK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BSK from S2C, [Save to disk]
  • View 2BSK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BSK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BSK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bsk_A] [2bsk_D] [2bsk_C] [2bsk_B] [2bsk_F] [2bsk_E] [2bsk]
  • SWISS-PROT database: [P62072] [Q9Y5J7]
  • Domain organization of [TIM10_HUMAN] [TIM9_HUMAN] by SWISSPFAM
  • Other resources with information on 2BSK
  • Community annotation for 2BSK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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