2BUG Hydrolase date Jun 13, 2005
title Solution Structure Of The Tpr Domain From Protein Phosphatase 5 In Complex With Hsp90 Derived Peptide
authors M.J.Cliff, R.Harris, D.Barford, J.E.Ladbury, M.A.Williams
compound source
Molecule: Serinethreonine Protein Phosphatase 5
Chain: A
Fragment: Tetratricopeptide Domain, Residues 19-147
Synonym: Protein Phosphatase 5, Pp5, Ppt
Ec: 3.1.3.16
Engineered: Yes
Mutation: Yes
Other_details: Residues 19-147 With N-Terminal His-Tag
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pqe31

Molecule: Hsp90
Chain: B
Fragment: C-Terminal Pentapeptide, Residues 1-5
Synonym: Dscr1
Other_details: N-Terminally Acetylated

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
ligand ACE enzyme Hydrolase E.C.3.1.3.16 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceConformational diversity in the TPR domain-mediated interaction of protein phosphatase 5 with Hsp90., Cliff MJ, Harris R, Barford D, Ladbury JE, Williams MA, Structure. 2006 Mar;14(3):415-26. PMID:16531226
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (757 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 2BUG
  • CSU: Contacts of Structural Units for 2BUG
  • Original NMR restraints for 2BUG from PDB
  • Retrieve 2BUG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BUG from S2C, [Save to disk]
  • View 2BUG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BUG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2BUG, from MSDmotif at EBI
  • Fold representative 2bug from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bug_A] [2bug] [2bug_B]
  • SWISS-PROT database: [P53041]
  • Domain organization of [PPP5_HUMAN] by SWISSPFAM
  • Domain found in 2BUG: [TPR ] by SMART
  • Alignments of the sequence of 2BUG with the sequences similar proteins can be viewed for 2BUG's classification [PPP5_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [PPP5_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2BUG
  • Community annotation for 2BUG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science