2BW0 Oxidoreductase date Jul 07, 2005
title Crystal Structure Of The Hydrolase Domain Of Human 10-Formyltetrahydrofolate 2 Dehydrogenase
authors D.J.Ogg, P.Stenmark, C.Arrowsmith, A.Edwards, M.Ehn, S.Graslund, M.Hammarstrom, M.Hallberg, T.Kotenyova, P.Nilsson-Ehle, P.Nordlund, C.Persson, J.Sagemark, H.Schuler, M.Sundstrom, A.Thorsell, D.Dobritzsch, J.Weigelt
compound source
Molecule: 10-Formyltetrahydrofolate Dehydrogenase
Chain: A
Fragment: Hydrolase Domain, Residues 1-307
Synonym: 10-Fthfdh
Ec: 1.5.1.6
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Pnic-Bsa4
symmetry Space Group: C 1 2 1
R_factor 0.171 R_Free 0.200
crystal
cell
length a length b length c angle alpha angle beta angle gamma
108.226 64.502 58.891 90.00 98.18 90.00
method X-Ray Diffractionresolution 1.7 Å
ligand SO4 enzyme Oxidoreductase E.C.1.5.1.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructures of the hydrolase domain of human 10-formyltetrahydrofolate dehydrogenase and its complex with a substrate analogue., Kursula P, Schuler H, Flodin S, Nilsson-Ehle P, Ogg DJ, Savitsky P, Nordlund P, Stenmark P, Acta Crystallogr D Biol Crystallogr. 2006 Nov;62(Pt 11):1294-9. Epub 2006, Oct 18. PMID:17057331
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (2bw0.pdb1.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 2BW0
  • CSU: Contacts of Structural Units for 2BW0
  • Likely Quarternary Molecular Structure file(s) for 2BW0
  • Structure Factors (597 Kb)
  • Retrieve 2BW0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BW0 from S2C, [Save to disk]
  • Re-refined 2bw0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BW0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BW0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2BW0, from MSDmotif at EBI
  • Fold representative 2bw0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bw0_A] [2bw0]
  • SWISS-PROT database: [O75891]
  • Domain organization of [FTHFD_HUMAN] by SWISSPFAM
  • Other resources with information on 2BW0
  • Community annotation for 2BW0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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