2BZG Transferase date Aug 17, 2005
title Crystal Structure Of Thiopurine S-Methyltransferase.
authors K.P.Battaile, H.Wu, H.Zeng, P.Loppnau, A.Dong, J.Weigelt, M.Sundst C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, A.N.Plotnikov, Struct Genomics Consortium (Sgc)
compound source
Molecule: Thiopurine S-Methyltransferase
Chain: A
Synonym: Thiopurine Methyltransferase
Ec: 2.1.1.67
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 42 21 2
R_factor 0.213 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
85.486 85.486 69.362 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.58 Å
ligand B3P, MSE, SAH enzyme Transferase E.C.2.1.1.67 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of allele variation of human thiopurine-S-methyltransferase., Wu H, Horton JR, Battaile K, Allali-Hassani A, Martin F, Zeng H, Loppnau P, Vedadi M, Bochkarev A, Plotnikov AN, Cheng X, Proteins. 2007 Apr 1;67(1):198-208. PMID:17243178
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (2bzg.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 2BZG
  • CSU: Contacts of Structural Units for 2BZG
  • Likely Quarternary Molecular Structure file(s) for 2BZG
  • Structure Factors (2801 Kb)
  • Retrieve 2BZG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BZG from S2C, [Save to disk]
  • Re-refined 2bzg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BZG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BZG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2BZG, from MSDmotif at EBI
  • Fold representative 2bzg from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bzg_A] [2bzg]
  • SWISS-PROT database: [P51580]
  • Domain organization of [TPMT_HUMAN] by SWISSPFAM
  • Other resources with information on 2BZG
  • Community annotation for 2BZG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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