2BZX Sh3 Domain date Aug 24, 2005
title Atomic Model Of Crkl-Sh3c Monomer
authors M.Harkiolaki, R.J.Gilbert, E.Y.Jones, S.M.Feller
compound source
Molecule: Crk-Like Protein
Chain: A
Fragment: Sh3 Domain
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Topp1
Expression_system_plasmid: Pgex-Kg
symmetry Space Group: P 41 21 2
R_factor 0.317 R_Free 0.374
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.285 53.285 51.193 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
Primary referenceThe C-terminal SH3 domain of CRKL as a dynamic dimerization module transiently exposing a nuclear export signal., Harkiolaki M, Gilbert RJ, Jones EY, Feller SM, Structure. 2006 Dec;14(12):1741-53. PMID:17161365
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (14 Kb) [Save to disk]
  • Biological Unit Coordinates (2bzx.pdb1.gz) 10 Kb
  • CSU: Contacts of Structural Units for 2BZX
  • Likely Quarternary Molecular Structure file(s) for 2BZX
  • Structure Factors (14 Kb)
  • Retrieve 2BZX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BZX from S2C, [Save to disk]
  • Re-refined 2bzx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2BZX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2BZX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BZX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bzx_A] [2bzx]
  • SWISS-PROT database: [P46109]
  • Domain organization of [CRKL_HUMAN] by SWISSPFAM
  • Domain found in 2BZX: [SH3 ] by SMART
    • Other resources with information on 2BZX
  • Community annotation for 2BZX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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