2C08	Transferase	date	Aug 26, 2005
title	Rat Endophilin A1 Bar Domain
authors	J.L.Gallop, H.M.Kent, H.T.Mcmahon, P.R.Evans
compound		source
Molecule: Sh3-Containing Grb2-Like Protein 2 Chain: A Fragment: Bar Domain, Residues 1-143 Synonym: Endophilin A1, Sh3 Domain Protein 2a, Sh3p4 Ec: 2.3.1.- Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Rat Organism_taxid: 10116 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid
symmetry	Space Group: I 41	R_factor 0.279 R_Free 0.295
crystal cell	length a length b length c angle alpha angle beta angle gamma 126.578 126.578 101.226 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.90 Å
ligand	MSE	enzyme	Transferase E.C.2.3.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Mechanism of endophilin N-BAR domain-mediated membrane curvature., Gallop JL, Jao CC, Kent HM, Butler PJ, Evans PR, Langen R, McMahon HT, EMBO J. 2006 Jun 21;25(12):2898-910. Epub 2006 Jun 8. PMID:16763559

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk] Biological Unit Coordinates (2c08.pdb1.gz) 66 Kb LPC: Ligand-Protein Contacts for 2C08 CSU: Contacts of Structural Units for 2C08 Likely Quarternary Molecular Structure file(s) for 2C08 Structure Factors (535 Kb) Retrieve 2C08 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2C08 from S2C, [Save to disk] Re-refined 2c08 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2C08 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2C08

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2C08, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2c08] [2c08_A] SWISS-PROT database: [O35179] Domain organization of [SH3G2_RAT] by SWISSPFAM Domain found in 2C08: [BAR ] by SMART

Other resources with information on 2C08

Community annotation for 2C08 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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