2C60 Transferase date Nov 04, 2005
title Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 3 Isoform 2 Phox Domain At 1.25 A Resolution
authors J.E.Debreczeni, E.Salah, E.Papagrigoriou, N.Burgess, F.Von Delft O.Gileadi, M.Sundstrom, A.Edwards, C.Arrowsmith, J.Weigelt, S.Kn
compound source
Molecule: Human Mitogen-Activated Protein Kinase Kinase Kin Isoform 2;
Chain: A
Fragment: Phox Domain, Residues 37-124
Synonym: Mapkerk Kinase Kinase 3, Mek Kinase 3, Mekk 3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: R3
Expression_system_vector: Pnic28-Bsa4
symmetry Space Group: C 1 2 1
R_factor 0.165 R_Free 0.182
length a length b length c angle alpha angle beta angle gamma
82.800 42.300 30.600 90.00 106.60 90.00
method X-Ray Diffractionresolution 1.25 Å
ligand CA, GOL, MSE enzyme Transferase E.C. BRENDA
note 2C60 is a representative structure
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (2c60.pdb1.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 2C60
  • CSU: Contacts of Structural Units for 2C60
  • Likely Quarternary Molecular Structure file(s) for 2C60
  • Structure Factors (328 Kb)
  • Retrieve 2C60 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2C60 from S2C, [Save to disk]
  • Re-refined 2c60 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2C60 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2C60
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2C60, from MSDmotif at EBI
  • Fold representative 2c60 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2c60] [2c60_A]
  • SWISS-PROT database: [Q99759]
  • Domain organization of [M3K3_HUMAN] by SWISSPFAM
  • Domain found in 2C60: [PB1 ] by SMART
  • Other resources with information on 2C60
  • Community annotation for 2C60 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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