2C63	Signaling Protein Peptide	date	Nov 07, 2005
title	14-3-3 Protein Eta (Human) Complexed To Peptide
authors	J.M.Elkins, X.Yang, C.E.A.Smee, C.Johansson, M.Sundstrom, A.Edwar J.Weigelt, C.Arrowsmith, D.A.Doyle
compound		source
Molecule: 14-3-3 Protein Eta Chain: A, B, C, D Synonym: Protein As1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_cell_line: Bl21(De3) Expression_system_plasmid: Pnic28-Bsa4 Other_details: The Mammalian Gene Collection, I.M.A.G.E. Co Clone Id 3543571;
Molecule: Consensus Peptide For 14-3-3 Proteins Chain: P, Q, R, S Other_details: Phosphoserine At Residue P 4, Q 4, R 4, S 4		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 1 21 1	R_factor 0.184 R_Free 0.248
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.251 79.398 125.109 90.00 95.15 90.00
method	X-Ray Diffraction	resolution	2.15 Å
ligand	SEP	enzyme
Gene Ontology	Chain Function Process Component A, D, C, B actin binding insulin-like growth factor r... protein binding sodium channel regulator act... enzyme binding protein domain specific bind... glucocorticoid receptor bind... ion channel binding regulation of sodium ion tra... glucocorticoid catabolic pro... intracellular protein transp... apoptotic process cellular membrane organizati... glucocorticoid receptor sign... regulation of neuron differe... positive regulation of trans... regulation of synaptic plast... negative regulation of dendr... intrinsic apoptotic signalin... positive regulation of prote... regulation of sodium ion tra... cytoplasm cytosol intercalated disc cytoplasmic vesicle membrane...
Primary reference	Structural basis for protein-protein interactions in the 14-3-3 protein family., Yang X, Lee WH, Sobott F, Papagrigoriou E, Robinson CV, Grossmann JG, Sundstrom M, Doyle DA, Elkins JM, Proc Natl Acad Sci U S A. 2006 Nov 14;103(46):17237-42. Epub 2006 Nov 3. PMID:17085597

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk] Biological Unit Coordinates (2c63.pdb1.gz) 80 Kb Biological Unit Coordinates (2c63.pdb2.gz) 81 Kb LPC: Ligand-Protein Contacts for 2C63 CSU: Contacts of Structural Units for 2C63 Likely Quarternary Molecular Structure file(s) for 2C63 Structure Factors (865 Kb) Retrieve 2C63 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2C63 from S2C, [Save to disk] Re-refined 2c63 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2C63 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 2C63

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2C63, from MSDmotif at EBI Fold representative 2c63 from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2c63_A] [2c63_B] [2c63_C] [2c63_D] [2c63_P] [2c63_Q] [2c63_R] [2c63_S] SWISS-PROT database: [Q04917] Domain organization of [1433F_HUMAN] by SWISSPFAM Domain found in 2C63: [14_3_3 ] by SMART Alignments of the sequence of 2C63 with the sequences similar proteins can be viewed for 2C63's classification [1433F_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [1433F_HUMAN] at ProtoMap. Click on the Cluster number.

Other resources with information on 2C63

Community annotation for 2C63 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2010 Bioinformatics Unit Weizmann Institute of Science

---