2C6G	Hydrolase	date	Nov 09, 2005
title	Membrane-Bound Glutamate Carboxypeptidase II (Gcpii) With Bo Glutamate
authors	J.R.Mesters, C.Barinka, W.Li, T.Tsukamoto, P.Majer, B.S.Slusher, J.Konvalinka, R.Hilgenfeld
compound		source
Molecule: Glutamate Carboxypeptidase II Chain: A Synonym: Membrane Glutamate Carboxypeptidase, Mgcp, N-Acety Alpha-Linked Acidic Dipeptidase I, Naaladase I, Pteroylpoly Glutamate Carboxypeptidase, Folylpoly-Gamma-Glutamate Carboxypeptidase, Fgcp, Folate Hydrolase 1, Prostate-Specif Membrane Antigen, Psma, Psm; Ec: 3.4.17.21 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Brain Expression_system: Drosophila Melanogaster Expression_system_taxid: 7227 Expression_system_cell_line: Schneider'S Cells
symmetry	Space Group: I 2 2 2	R_factor 0.186 R_Free 0.228
crystal cell	length a length b length c angle alpha angle beta angle gamma 102.435 130.428 159.775 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	BMA, CA, CL, GLU, MAN, NAG, ZN	enzyme	Hydrolase E.C.3.4.17.21 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of glutamate carboxypeptidase II, a drug target in neuronal damage and prostate cancer., Mesters JR, Barinka C, Li W, Tsukamoto T, Majer P, Slusher BS, Konvalinka J, Hilgenfeld R, EMBO J. 2006 Mar 22;25(6):1375-84. Epub 2006 Feb 9. PMID:16467855

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk] Biological Unit Coordinates (2c6g.pdb1.gz) 219 Kb LPC: Ligand-Protein Contacts for 2C6G CSU: Contacts of Structural Units for 2C6G Likely Quarternary Molecular Structure file(s) for 2C6G Structure Factors (834 Kb) Retrieve 2C6G in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2C6G from S2C, [Save to disk] Re-refined 2c6g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2C6G in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2C6G

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2C6G, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2c6g_A] [2c6g] SWISS-PROT database: [Q04609] Domain organization of [FOLH1_HUMAN] by SWISSPFAM

Other resources with information on 2C6G

Community annotation for 2C6G at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---