2CCS Chaperone date Jan 18, 2006
title Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol
authors X.Barril, M.C.Beswick, A.Collier, M.J.Drysdale, B.W.Dymock, A.Fink, K.Grant, R.Howes, A.M.Jordan, A.Massey, A.Surgenor, J.Wayne, P.Workman, L.Wright
compound source
Molecule: Heat Shock Protein Hsp-90 Alpha
Chain: A
Fragment: N-Terminal Domain Residues 1-236
Synonym: Hsp 86
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Skin
Tissue: Melanoma
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_variant: De3
Expression_system_plasmid: Pet-19
symmetry Space Group: I 2 2 2
R_factor 0.227 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.978 88.406 99.974 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.79 Å
ligand 4BH BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference4-Amino derivatives of the Hsp90 inhibitor CCT018159., Barril X, Beswick MC, Collier A, Drysdale MJ, Dymock BW, Fink A, Grant K, Howes R, Jordan AM, Massey A, Surgenor A, Wayne J, Workman P, Wright L, Bioorg Med Chem Lett. 2006 May 1;16(9):2543-8. Epub 2006 Feb 9. PMID:16480864
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (2ccs.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 2CCS
  • CSU: Contacts of Structural Units for 2CCS
  • Likely Quarternary Molecular Structure file(s) for 2CCS
  • Retrieve 2CCS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CCS from S2C, [Save to disk]
  • View 2CCS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CCS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2CCS, from MSDmotif at EBI
  • Fold representative 2ccs from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ccs] [2ccs_A]
  • SWISS-PROT database: [P07900]
  • Domain organization of [HS90A_HUMAN] by SWISSPFAM
  • Domain found in 2CCS: [HATPase_c ] by SMART
  • Alignments of the sequence of 2CCS with the sequences similar proteins can be viewed for 2CCS's classification [HS90A_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [HS90A_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2CCS
  • Community annotation for 2CCS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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