2CE9 Transcription Regulation date Feb 03, 2006
title A Wrpw Peptide Bound To The Groucho-Tle Wd40 Domain.
authors L.M.Pickles, S.M.Roe, L.H.Pearl
compound source
Molecule: Transducin-Like Enhancer Protein 1
Chain: A, B, C, D
Fragment: Partial Sp And Whole Wd40 Domains, Residues 443-7
Synonym: Esg1, E(Sp1) Homolog
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Baculovirus

Molecule: Wrpw Peptide
Chain: X, Y

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.178 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
107.810 56.478 126.642 90.00 112.68 90.00
method X-Ray Diffractionresolution 2.12 Å
Primary referenceMolecular recognition of transcriptional repressor motifs by the WD domain of the Groucho/TLE corepressor., Jennings BH, Pickles LM, Wainwright SM, Roe SM, Pearl LH, Ish-Horowicz D, Mol Cell. 2006 Jun 9;22(5):645-55. PMID:16762837
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (233 Kb) [Save to disk]
  • Biological Unit Coordinates (2ce9.pdb1.gz) 117 Kb
  • Biological Unit Coordinates (2ce9.pdb2.gz) 113 Kb
  • CSU: Contacts of Structural Units for 2CE9
  • Likely Quarternary Molecular Structure file(s) for 2CE9
  • Structure Factors (1101 Kb)
  • Retrieve 2CE9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CE9 from S2C, [Save to disk]
  • Re-refined 2ce9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CE9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CE9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2CE9, from MSDmotif at EBI
  • Fold representative 2ce9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ce9] [2ce9_C] [2ce9_B] [2ce9_A] [2ce9_D] [2ce9_Y] [2ce9_X]
  • SWISS-PROT database: [Q04724]
  • Domain organization of [TLE1_HUMAN] by SWISSPFAM
  • Domain found in 2CE9: [WD40 ] by SMART
  • Other resources with information on 2CE9
  • Community annotation for 2CE9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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