2CEI Oxidoreductase date Feb 07, 2006
title Recombinant Human H Ferritin, K86q Mutant, Soaked With Zn
authors L.Toussaint, R.R.Crichton, J.P.Declercq
compound source
Molecule: Ferritin Heavy Chain
Chain: A
Synonym: Ferritin H Subunit, Proliferation-Inducing Gene 15
Ec: 1.16.3.1
Engineered: Yes
Mutation: Yes
Other_details: Soaked With Zn
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M5219
Expression_system_vector: Pdp231
symmetry Space Group: F 4 3 2
R_factor 0.174 R_Free 0.192
crystal
cell
length a length b length c angle alpha angle beta angle gamma
179.419 179.419 179.419 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ZN enzyme Oxidoreductase E.C.1.16.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHigh-resolution X-ray structures of human apoferritin H-chain mutants correlated with their activity and metal-binding sites., Toussaint L, Bertrand L, Hue L, Crichton RR, Declercq JP, J Mol Biol. 2007 Jan 12;365(2):440-52. Epub 2006 Oct 7. PMID:17070541
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (2cei.pdb1.gz) 741 Kb
  • LPC: Ligand-Protein Contacts for 2CEI
  • CSU: Contacts of Structural Units for 2CEI
  • Likely Quarternary Molecular Structure file(s) for 2CEI
  • Structure Factors (318 Kb)
  • Retrieve 2CEI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CEI from S2C, [Save to disk]
  • Re-refined 2cei structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CEI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CEI
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2CEI, from MSDmotif at EBI
  • Fold representative 2cei from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cei] [2cei_A]
  • SWISS-PROT database: [P02794]
  • Domain organization of [FRIH_HUMAN] by SWISSPFAM
  • Other resources with information on 2CEI
  • Community annotation for 2CEI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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