2CH0 Nuclear Protein date Mar 10, 2006
title Solution Structure Of The Human Man1 C-Terminal Domain (Resi 775)
authors S.Caputo, J.Couprie, I.Duband-Goulet, F.Lin, S.Braud, M.Gondry, H. B.Gilquin, S.Zinn-Justin
compound source
Molecule: Inner Nuclear Membrane Protein Man1
Chain: A
Fragment: 655-775
Synonym: Lem Domain Containing Protein 3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pgex-4t-1
methodSolution NMR
note 2CH0 is a representative structure
Primary referenceThe carboxyl-terminal nucleoplasmic region of MAN1 exhibits a DNA binding winged helix domain., Caputo S, Couprie J, Duband-Goulet I, Konde E, Lin F, Braud S, Gondry M, Gilquin B, Worman HJ, Zinn-Justin S, J Biol Chem. 2006 Jun 30;281(26):18208-15. Epub 2006 Apr 28. PMID:16648637
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (751 Kb) [Save to disk]
  • Biological Unit Coordinates (2ch0.pdb1.gz) 38 Kb
  • CSU: Contacts of Structural Units for 2CH0
  • Retrieve 2CH0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CH0 from S2C, [Save to disk]
  • View 2CH0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CH0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2CH0, from MSDmotif at EBI
  • Fold representative 2ch0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ch0_A] [2ch0]
  • SWISS-PROT database: [Q9Y2U8]
  • Domain organization of [MAN1_HUMAN] by SWISSPFAM
  • Other resources with information on 2CH0
  • Community annotation for 2CH0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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