2CJY Extended substrate recognition in caspase-3 revealed by high resolution X-ray structure analysis date
authors Ganesan, R., Mittl, P.R.E., Jelakovic, S., Grutter, M.G.
compound source
R_Free 0.206
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.67
ligand 0QE, PHQ enzyme


Primary referenceExtended substrate recognition in caspase-3 revealed by high resolution X-ray structure analysis., Ganesan R, Mittl PR, Jelakovic S, Grutter MG, J Mol Biol. 2006 Jun 23;359(5):1378-88. Epub 2006 May 11. PMID:16787777
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (2cjy.pdb1.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 2CJY
  • CSU: Contacts of Structural Units for 2CJY
  • Likely Quarternary Molecular Structure file(s) for 2CJY
  • Structure Factors (216 Kb)
  • Retrieve 2CJY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CJY from S2C, [Save to disk]
  • Re-refined 2cjy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CJY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CJY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CJY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cjy_A] [2cjy_B] [2cjy] [2cjy_I]
  • SWISS-PROT database: [P42574]
  • Domain organization of [CASP3_HUMAN] by SWISSPFAM
  • Domain found in 2CJY: [CASc ] by SMART
  • Other resources with information on 2CJY
  • Community annotation for 2CJY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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