2COA Signaling Protein date May 17, 2005
title Solution Structure Of The Ph Domain Of Protein Kinase C, D2 Human
authors H.Li, K.Saito, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Str Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Protein Kinase C, D2 Type
Chain: A
Fragment: Ph Domain
Synonym: Npkc-D2, Protein Kinase D2, Hspc187
Ec: 2.7.1.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pkd2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P041129-04
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (627 Kb) [Save to disk]
  • Biological Unit Coordinates (2coa.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 2COA
  • Retrieve 2COA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2COA from S2C, [Save to disk]
    • View 2COA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2COA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2COA, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2coa_A] [2coa]
  • SWISS-PROT database: [Q9BZL6]
  • Domain organization of [KPCD2_HUMAN] by SWISSPFAM
  • Domain found in 2COA: [PH ] by SMART
    • Other resources with information on 2COA
  • Community annotation for 2COA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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