2COK Transferase date May 17, 2005
title Solution Structure Of Brct Domain Of Poly(Adp-Ribose) Polyme
authors T.Nagashima, F.Hayashi, S.Yokoyama, Riken Structural Genomicsp Initiative (Rsgi)
compound source
Molecule: Poly [Adp-Ribose] Polymerase-1
Chain: A
Fragment: Brca1 C-Turminus (Brct) Domain
Synonym: Parp-1, Adprt, Nad(+) Adp-Ribosyltransferase-1, Po Ribose] Synthetase-1;
Ec: 2.4.2.30
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Parp1, Adprt, Ppol
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040809-01
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand
enzyme Transferase E.C.2.4.2.30 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (576 Kb) [Save to disk]
  • Biological Unit Coordinates (2cok.pdb1.gz) 28 Kb
  • CSU: Contacts of Structural Units for 2COK
  • Original NMR restraints for 2COK from PDB
  • Retrieve 2COK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2COK from S2C, [Save to disk]
  • View 2COK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2COK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2COK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cok] [2cok_A]
  • SWISS-PROT database: [P09874]
  • Domain organization of [PARP1_HUMAN] by SWISSPFAM
  • Domain found in 2COK: [BRCT ] by SMART
  • Other resources with information on 2COK
  • Community annotation for 2COK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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