2COO Transferase date May 18, 2005
title Solution Structure Of The E3_binding Domain Of Dihydrolipoam Branched Chaintransacylase
authors H.P.Zhang, F.Hayashi, S.Yokoyama, Riken Structural Genomicspro Initiative (Rsgi)
compound source
Molecule: Lipoamide Acyltransferase Component Of Branched-C Alpha-Keto Acid Dehydrogenase Complex, Mitochondrial;
Chain: A
Fragment: E3_binding Domain
Synonym: Dihydrolipoyllysine-Residue 2-Methylpropanoyl, Tra E2, Dihydrolipoamide Branched Chain Transacylase, Bckad E2
Ec: 2.3.1.168
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dbt, Bcate2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040510-10
Other_details: Cell Free Protein Synthesis
methodSolution NMR
ligand
enzyme Transferase E.C.2.3.1.168 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (349 Kb) [Save to disk]
  • Biological Unit Coordinates (2coo.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 2COO
  • Retrieve 2COO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2COO from S2C, [Save to disk]
    • View 2COO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2COO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2COO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2coo] [2coo_A]
  • SWISS-PROT database: [P11182]
  • Domain organization of [ODB2_HUMAN] by SWISSPFAM
    • Other resources with information on 2COO
  • Community annotation for 2COO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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