2CPR Gene Regulation date May 19, 2005
title Solution Structure Of The Hrdc Domain Of Human Exosome Compo
authors T.Nagata, Y.Muto, M.Inoue, T.Kigawa, T.Terada, M.Shirouzu, S.Yokoy Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Exosome Component 10
Chain: A
Fragment: Hrdc
Synonym: Polymyositisscleroderma Autoantigen 2, Autoantige 2, Polymyositisscleroderma Autoantigen 100 Kda, Pmscl-100 Polymyositis-Scleroderma Overlap Syndrome Associated Autoan
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Exosc10
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040906-09
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (659 Kb) [Save to disk]
  • Biological Unit Coordinates (2cpr.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 2CPR
  • Original NMR restraints for 2CPR from PDB
  • Retrieve 2CPR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CPR from S2C, [Save to disk]
    • View 2CPR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2CPR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CPR, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cpr] [2cpr_A]
  • SWISS-PROT database: [Q01780]
  • Domain organization of [EXOSX_HUMAN] by SWISSPFAM
  • Domain found in 2CPR: [HRDC ] by SMART
    • Other resources with information on 2CPR
  • Community annotation for 2CPR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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