2CQO Ribosome date May 20, 2005
title Solution Structure Of The S1 Rna Binding Domain Of Human Hyp Protein Flj11067
authors S.Suzuki, Y.Muto, M.Inoue, T.Kigawa, T.Terada, M.Shirouzu, S.Yokoy Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Nucleolar Protein Of 40 Kda
Chain: A
Fragment: S1 Domain
Synonym: Hypothetical Protein Flj11067, Pno40, Putative S1 Binding Domain Protein, Ps1d Protein, Pnn-Interacting Nucle Protein;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ps1d
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050111-18
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (604 Kb) [Save to disk]
  • Biological Unit Coordinates (2cqo.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 2CQO
  • Original NMR restraints for 2CQO from PDB
  • Retrieve 2CQO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CQO from S2C, [Save to disk]
    • View 2CQO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2CQO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CQO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cqo] [2cqo_A]
  • SWISS-PROT database: [Q9NP64]
  • Domain organization of [NO40_HUMAN] by SWISSPFAM
  • Domain found in 2CQO: [S1 ] by SMART
    • Other resources with information on 2CQO
  • Community annotation for 2CQO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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