2CRR Protein Transport date May 20, 2005
title Solution Structure Of Arfgap Domain From Human Smap1
authors T.Suetake, M.Sato, F.Hayashi, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Stromal Membrane-Associated Protein Smap1b
Chain: A
Fragment: Arfgap Domain
Synonym: Smap1, Hypothetical Protein Otthump00000039271
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Otthump00000039271, Gd:Rp1-104a17.1-001, Rp1-104a17.1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040628-12
Other_details: Cell Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (746 Kb) [Save to disk]
  • Biological Unit Coordinates (2crr.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 2CRR
  • CSU: Contacts of Structural Units for 2CRR
  • Retrieve 2CRR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CRR from S2C, [Save to disk]
    • View 2CRR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2CRR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CRR, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2crr] [2crr_A]
  • SWISS-PROT database: [Q8IYB5]
  • Domain organization of [SMAP1_HUMAN] by SWISSPFAM
  • Domain found in 2CRR: [ArfGap ] by SMART
    • Other resources with information on 2CRR
  • Community annotation for 2CRR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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