2CS2 Transferase date May 20, 2005
title Solution Structure Of The Second Zn-Finger Domain Of Poly(Adp-Ribose) Polymerase-1
authors T.Nagashima, F.Hayashi, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Poly [Adp-Ribose] Polymerase-1
Chain: A
Fragment: Zf-Parp
Synonym: Parp-1, Adprt, Nad+, Adp-Ribosyltransferase-1, Poly[Adp-Ribose] Synthetase-1;
Ec: 2.4.2.30
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Parp1, Adprt, Ppol
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040809-08
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme Transferase E.C.2.4.2.30 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (686 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 2CS2
  • CSU: Contacts of Structural Units for 2CS2
  • Original NMR restraints for 2CS2 from PDB
  • Retrieve 2CS2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CS2 from S2C, [Save to disk]
  • View 2CS2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CS2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2CS2, from MSDmotif at EBI
  • Fold representative 2cs2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cs2] [2cs2_A]
  • SWISS-PROT database: [P09874]
  • Domain organization of [PARP1_HUMAN] by SWISSPFAM
  • Domain found in 2CS2: [zf-PARP ] by SMART
  • Other resources with information on 2CS2
  • Community annotation for 2CS2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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