2CT1 Transcription date May 23, 2005
title Solution Structure Of The Zinc Finger Domain Of Transcriptio Repressor Ctcf Protein
authors K.Miyamoto, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Struc Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Transcriptional Repressor Ctcf
Chain: A
Fragment: Zinc Finger Domain
Synonym: Ccctc-Binding Factor, Ctcfl Paralog, 11-Zinc Finge
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ctcf
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040809-05
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (389 Kb) [Save to disk]
  • Biological Unit Coordinates (2ct1.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 2CT1
  • CSU: Contacts of Structural Units for 2CT1
  • Retrieve 2CT1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CT1 from S2C, [Save to disk]
  • View 2CT1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CT1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CT1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ct1_A] [2ct1]
  • SWISS-PROT database: [P49711]
  • Domain organization of [CTCF_HUMAN] by SWISSPFAM
  • Domain found in 2CT1: [ZnF_C2H2 ] by SMART
  • Other resources with information on 2CT1
  • Community annotation for 2CT1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science