2CT2 Ligase date May 23, 2005
title Solution Structure Of The Ring Domain Of The Tripartite Motif Protein 32
authors K.Miyamoto, N.Tochio, M.Sato, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Tripartite Motif Protein 32
Chain: A
Fragment: Ring Domain
Synonym: Zinc-Finger Protein Ht2a, 72 Kda Tat-Interacting Protein;
Ec: 6.3.2.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Trim32
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P041101-17
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme Ligase E.C.6.3.2 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (446 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 2CT2
  • CSU: Contacts of Structural Units for 2CT2
  • Retrieve 2CT2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CT2 from S2C, [Save to disk]
  • View 2CT2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CT2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2CT2, from MSDmotif at EBI
  • Fold representative 2ct2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ct2_A] [2ct2]
  • SWISS-PROT database: [Q13049]
  • Domain organization of [TRI32_HUMAN] by SWISSPFAM
  • Domain found in 2CT2: [RING ] by SMART
  • Other resources with information on 2CT2
  • Community annotation for 2CT2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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