2CTQ Chaperone date May 24, 2005
title Solution Structure Of J-Domain From Human Dnaj Subfamily C M
authors N.Kobayashi, N.Tochio, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, R Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Dnaj Homolog Subfamily C Member 12
Chain: A
Fragment: J-Domain
Synonym: J Domain Containing Protein 1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dnajc12
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040517-12
Other_details: Cell Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (581 Kb) [Save to disk]
  • Biological Unit Coordinates (2ctq.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 2CTQ
  • Retrieve 2CTQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CTQ from S2C, [Save to disk]
    • View 2CTQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2CTQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CTQ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ctq_A] [2ctq]
  • SWISS-PROT database: [Q9UKB3]
  • Domain organization of [DJC12_HUMAN] by SWISSPFAM
  • Domain found in 2CTQ: [DnaJ ] by SMART
    • Other resources with information on 2CTQ
  • Community annotation for 2CTQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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