2CUF Dna Binding Protein date May 26, 2005
title Solution Structure Of The Homeobox Domain Of The Human Hypothetical Protein Flj21616
authors S.Ohnishi, T.Kigawa, T.Tomizawa, S.Koshiba, M.Inoue, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Flj21616 Protein
Chain: A
Fragment: Homeobox Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Flj21616
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P041004-01
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (501 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2CUF
  • Retrieve 2CUF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CUF from S2C, [Save to disk]
  • View 2CUF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CUF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2CUF, from MSDmotif at EBI
  • Fold representative 2cuf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cuf] [2cuf_A]
  • SWISS-PROT database: [Q6NT76]
  • Domain organization of [HMBX1_HUMAN] by SWISSPFAM
  • Domain found in 2CUF: [HOX ] by SMART
  • Other resources with information on 2CUF
  • Community annotation for 2CUF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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