2CWU Oxidoreductase date Jun 26, 2005
title Substrate Schiff-Base Intermediate Of Copper Amine Oxidase F Arthrobacter Globiformis
authors Y.C.Chiu, T.Okajima, T.Murakawa, M.Uchida, M.Taki, S.Hirota, M.Kim H.Yamaguchi, Y.Kawano, N.Kamiya, S.Kuroda, H.Hayashi, Y.Yamamoto K.Tanizawa
compound source
Molecule: Phenylethylamine Oxidase
Chain: A, B
Synonym: Amine Oxidase
Ec: 1.4.3.6
Engineered: Yes
Mutation: Yes
Organism_scientific: Arthrobacter Globiformis
Organism_taxid: 1665
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Cd03
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pepo-02-D298a
symmetry Space Group: I 1 2 1
R_factor 0.176 R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
157.840 62.730 183.890 90.00 112.31 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand 1TY, CU enzyme Oxidoreductase E.C.1.4.3.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceKinetic and structural studies on the catalytic role of the aspartic acid residue conserved in copper amine oxidase., Chiu YC, Okajima T, Murakawa T, Uchida M, Taki M, Hirota S, Kim M, Yamaguchi H, Kawano Y, Kamiya N, Kuroda S, Hayashi H, Yamamoto Y, Tanizawa K, Biochemistry. 2006 Apr 4;45(13):4105-20. PMID:16566584
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (225 Kb) [Save to disk]
  • Biological Unit Coordinates (2cwu.pdb1.gz) 215 Kb
  • LPC: Ligand-Protein Contacts for 2CWU
  • CSU: Contacts of Structural Units for 2CWU
  • Likely Quarternary Molecular Structure file(s) for 2CWU
  • Structure Factors (1284 Kb)
  • Retrieve 2CWU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CWU from S2C, [Save to disk]
  • Re-refined 2cwu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CWU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CWU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CWU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cwu_B] [2cwu] [2cwu_A]
  • SWISS-PROT database: [P46881]
  • Domain organization of [PAOX_ARTGO] by SWISSPFAM
  • Other resources with information on 2CWU
  • Community annotation for 2CWU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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