2CWX Lyase date Jun 27, 2005
title Crystal Structure Of Octameric Ribulose-1,5-Bisphosphate Carboxylaseoxygenase (Rubisco) From Pyrococcus Horikoshii Crystal)
authors E.Mizohata, C.Mishima, R.Akasaka, H.Uda, T.Terada, M.Shirouzu, S.Y Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Ribulose Bisphosphate Carboxylase
Chain: A, E
Synonym: Ribulose-1,5-Bisphosphate Carboxylaseoxygenase, R
Ec: 4.1.1.39
Engineered: Yes
Organism_scientific: Pyrococcus Horikoshii
Organism_taxid: 70601
Strain: Ot3
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
symmetry Space Group: P 4 21 2
R_factor 0.176 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
143.992 143.992 101.417 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand
enzyme Lyase E.C.4.1.1.39 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, E


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (2cwx.pdb1.gz) 540 Kb
  • Biological Unit Coordinates (2cwx.pdb2.gz) 136 Kb
  • CSU: Contacts of Structural Units for 2CWX
  • Likely Quarternary Molecular Structure file(s) for 2CWX
  • Structure Factors (1286 Kb)
  • Retrieve 2CWX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CWX from S2C, [Save to disk]
  • Re-refined 2cwx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CWX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CWX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CWX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cwx_E] [2cwx_A] [2cwx]
  • SWISS-PROT database: [O58677]
  • Domain organization of [RBL_PYRHO] by SWISSPFAM
  • Other resources with information on 2CWX
  • Community annotation for 2CWX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science