2CX0 Structural Genomics, Unknown Function date Jun 27, 2005
title Crystal Structure Of A Pua Domain (Ape0525) From The Aeropyr K1 (Sulfate Complex)
authors E.Mizohata, S.Morita, K.Nagano, H.Uda, T.Terada, M.Shirouzu, S.Yok Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Hypothetical Protein Ape0525
Chain: A
Engineered: Yes
 Organism_scientific: Aeropyrum Pernix
Organism_taxid: 272557
Strain: K1
Gene: Ape0525
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 1 21 1
R_factor 0.173 R_Free 0.199
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.331 48.135 53.847 90.00 102.50 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand MSE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (2cx0.pdb1.gz) 33 Kb
  • LPC: Ligand-Protein Contacts for 2CX0
  • CSU: Contacts of Structural Units for 2CX0
  • Likely Quarternary Molecular Structure file(s) for 2CX0
  • Structure Factors (259 Kb)
  • Retrieve 2CX0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CX0 from S2C, [Save to disk]
  • Re-refined 2cx0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2CX0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2CX0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CX0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cx0_A] [2cx0]
  • SWISS-PROT database: [Q9YEQ6]
  • Domain organization of [Q9YEQ6_AERPE] by SWISSPFAM
  • Domain found in 2CX0: [PUA ] by SMART
    • Other resources with information on 2CX0
  • Community annotation for 2CX0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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