2CX3 Oxidoreductase date Jun 27, 2005
title Crystal Structure Of A Bacterioferritin Comigratory Protein Peroxiredoxin From The Aeropyrum Pernix K1 (Form-1 Crystal)
authors E.Mizohata, K.Murayama, M.Idaka, A.Tatsuguchi, T.Terada, M.Shirou S.Yokoyama, Riken Structural Genomicsproteomics Initiative
compound source
Molecule: Bacterioferritin Comigratory Protein
Chain: A, B, C, D
Synonym: Bacterioferritin Comigratory Protein Peroxiredoxin
Ec: 1.11.1.15
Engineered: Yes
Organism_scientific: Aeropyrum Pernix
Organism_taxid: 272557
Strain: K1
Gene: Ape2125
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: P 64
R_factor 0.206 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
126.990 126.990 104.856 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.64 Å
ligand MSE enzyme Oxidoreductase E.C.1.11.1.15 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • peroxidase activity
  • antioxidant activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk]
  • Biological Unit Coordinates (2cx3.pdb1.gz) 109 Kb
  • LPC: Ligand-Protein Contacts for 2CX3
  • CSU: Contacts of Structural Units for 2CX3
  • Likely Quarternary Molecular Structure file(s) for 2CX3
  • Structure Factors (417 Kb)
  • Retrieve 2CX3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CX3 from S2C, [Save to disk]
  • Re-refined 2cx3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CX3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CX3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CX3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cx3_C] [2cx3] [2cx3_B] [2cx3_A] [2cx3_D]
  • SWISS-PROT database: [Q9YA14]
  • Domain organization of [Q9YA14_AERPE] by SWISSPFAM
  • Other resources with information on 2CX3
  • Community annotation for 2CX3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science