2CXA Transferase date Jun 28, 2005
title Crystal Structure Of Leucylphenylalanyl-Trna Protein Transferase From Escherichia Coli
authors M.Kato-Murayama, Y.Bessho, M.Shirouzu, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Leucylphenylalanyl-Trna-Protein Transferase
Chain: A
Synonym: Lf- Transferase, Leucyltransferase, Phenyalanyltransferase;
Ec: 2.3.2.6
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pca24n
symmetry Space Group: C 1 2 1
R_factor 0.187 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.277 44.784 76.376 90.00 108.36 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand MSE enzyme Transferase E.C.2.3.2.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe crystal structure of leucyl/phenylalanyl-tRNA-protein transferase from Escherichia coli., Dong X, Kato-Murayama M, Muramatsu T, Mori H, Shirouzu M, Bessho Y, Yokoyama S, Protein Sci. 2007 Mar;16(3):528-34. Epub 2007 Jan 22. PMID:17242373
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (2cxa.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 2CXA
  • CSU: Contacts of Structural Units for 2CXA
  • Likely Quarternary Molecular Structure file(s) for 2CXA
  • Structure Factors (221 Kb)
  • Retrieve 2CXA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CXA from S2C, [Save to disk]
  • Re-refined 2cxa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CXA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CXA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CXA, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cxa] [2cxa_A]
  • SWISS-PROT database: [P0A8P1]
  • Domain organization of [LFTR_ECOLI] by SWISSPFAM
  • Other resources with information on 2CXA
  • Community annotation for 2CXA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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