2D21 Sugar Binding Protein date Sep 02, 2005
title Nmr Structure Of Stereo-Array Isotope Labelled (Sail) Maltodextrin-Binding Protein (Mbp)
authors M.Kainosho, T.Torizawa, Y.Iwashita, T.Terauchi, A.M.Ono, P.Guntert
compound source
Molecule: Maltose-Binding Periplasmic Protein
Chain: A
Synonym: Maltodextrin-Binding Protein, Mmbp, Mbp
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
  • carbohydrate transmembrane t...

  • Primary referenceOptimal isotope labelling for NMR protein structure determinations., Kainosho M, Torizawa T, Iwashita Y, Terauchi T, Mei Ono A, Guntert P, Nature. 2006 Mar 2;440(7080):52-7. PMID:16511487
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1916 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2D21
  • Retrieve 2D21 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D21 from S2C, [Save to disk]
  • View 2D21 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2D21
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2D21, from MSDmotif at EBI
  • Fold representative 2d21 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d21_A] [2d21]
  • SWISS-PROT database: [P0AEX9]
  • Belongs to the atp-binding cassette (abc) superfamily according to TCDB.
  • Domain organization of [MALE_ECOLI] by SWISSPFAM
  • Other resources with information on 2D21
  • Community annotation for 2D21 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science