2D2I date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAP, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, R, Q, A, O, P


Primary referenceStructure of NADP-dependent glyceraldehyde-3-phosphate dehydrogenase from Synechococcus PCC7942 complexed with NADP., Kitatani T, Nakamura Y, Wada K, Kinoshita T, Tamoi M, Shigeoka S, Tada T, Acta Crystallograph Sect F Struct Biol Cryst Commun. 2006 Apr 1;62(Pt, 4):315-9. Epub 2006 Mar 10. PMID:16582475
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (332 Kb) [Save to disk]
  • Biological Unit Coordinates (2d2i.pdb1.gz) 221 Kb
  • Biological Unit Coordinates (2d2i.pdb2.gz) 217 Kb
  • LPC: Ligand-Protein Contacts for 2D2I
  • CSU: Contacts of Structural Units for 2D2I
  • Likely Quarternary Molecular Structure file(s) for 2D2I
  • Structure Factors (575 Kb)
  • Retrieve 2D2I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D2I from S2C, [Save to disk]
  • Re-refined 2d2i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2D2I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d2i] [2d2i_A] [2d2i_B] [2d2i_O] [2d2i_P] [2d2i_Q] [2d2i_R]
  • SWISS-PROT database: [Q55245]
  • Domain found in 2D2I: [Gp_dh_N ] by SMART

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