2D2O		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, GLC	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Structure of a complex of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with maltohexaose demonstrates the important role of aromatic residues at the reducing end of the substrate binding cleft., Ohtaki A, Mizuno M, Yoshida H, Tonozuka T, Sakano Y, Kamitori S, Carbohydr Res. 2006 Jun 12;341(8):1041-6. Epub 2006 Mar 27. PMID:16564038

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (215 Kb) [Save to disk] Biological Unit Coordinates (2d2o.pdb1.gz) 209 Kb LPC: Ligand-Protein Contacts for 2D2O CSU: Contacts of Structural Units for 2D2O Likely Quarternary Molecular Structure file(s) for 2D2O Structure Factors (868 Kb) Retrieve 2D2O in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2D2O from S2C, [Save to disk] Re-refined 2d2o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2D2O in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2d2o] [2d2o_A] [2d2o_B] SWISS-PROT database: [Q08751] Domain found in 2D2O: [Aamy ] by SMART

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