2D42 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
note 2D42 is a representative structure
Primary referenceNontoxic crystal protein from Bacillus thuringiensis demonstrates a remarkable structural similarity to beta-pore-forming toxins., Akiba T, Higuchi K, Mizuki E, Ekino K, Shin T, Ohba M, Kanai R, Harata K, Proteins. 2006 Apr 1;63(1):243-8. PMID:16400649
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk]
  • Biological Unit Coordinates (2d42.pdb1.gz) 42 Kb
  • Biological Unit Coordinates (2d42.pdb2.gz) 41 Kb
  • CSU: Contacts of Structural Units for 2D42
  • Likely Quarternary Molecular Structure file(s) for 2D42
  • Structure Factors (290 Kb)
  • Retrieve 2D42 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D42 from S2C, [Save to disk]
  • Re-refined 2d42 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2D42 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d42] [2d42_A] [2d42_B]
  • SWISS-PROT database: [Q6L5X8]
  • Belongs to the crystal protein (cry) family according to TCDB.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science