2D46 Metal Transport date Oct 10, 2005
title Solution Structure Of The Human Beta4a-A Domain
authors A.C.Vendel, C.D.Rithner, B.A.Lyons, W.A.Horne
compound source
Molecule: Calcium Channel, Voltage-Dependent, Beta 4 Subuni A;
Chain: A
Fragment: N-Terminal A Domain
Synonym: Calcium Channel Beta4a Subunit
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Human Cerebellum, Presynaptic
Gene: Cacnb4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-Codonplus(De3)-Ril
Expression_system_vector_type: Pet-15b
Expression_system_plasmid: Pet-15b:B4a-A
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the N-terminal A domain of the human voltage-gated Ca2+channel beta4a subunit., Vendel AC, Rithner CD, Lyons BA, Horne WA, Protein Sci. 2006 Feb;15(2):378-83. Epub 2005 Dec 29. PMID:16385006
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (18 Kb) [Save to disk]
  • Biological Unit Coordinates (2d46.pdb1.gz) 15 Kb
  • CSU: Contacts of Structural Units for 2D46
  • Retrieve 2D46 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D46 from S2C, [Save to disk]
    • View 2D46 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2D46
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2D46, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d46_A] [2d46]
  • SWISS-PROT database: [O00305]
  • Belongs to the ca(2+) channel auxiliary subunit β types 1-4 (cca-β) family according to TCDB.
  • Domain organization of [CACB4_HUMAN] by SWISSPFAM
    • Other resources with information on 2D46
  • Community annotation for 2D46 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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