2D68 Cell Cycle date Nov 10, 2005
title Structure Of The N-Terminal Domain Of Fop (Fgfr1op) Protein
authors A.Mikolajka
compound source
Molecule: Fop
Chain: A, B
Fragment: Residues 54-135
Synonym: Fgfr1op
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 De3, B834 De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet46 Ek\Lic
symmetry Space Group: P 21 21 2
R_factor 0.205 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.840 92.180 37.110 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the N-terminal Domain of the FOP (FGFR1OP) Protein and Implications for its Dimerization and Centrosomal Localization., Mikolajka A, Yan X, Popowicz GM, Smialowski P, Nigg EA, Holak TA, J Mol Biol. 2006 Jun 16;359(4):863-75. Epub 2006 Apr 24. PMID:16690081
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (2d68.pdb1.gz) 28 Kb
  • Biological Unit Coordinates (2d68.pdb2.gz) 56 Kb
  • CSU: Contacts of Structural Units for 2D68
  • Likely Quarternary Molecular Structure file(s) for 2D68
  • Structure Factors (154 Kb)
  • Retrieve 2D68 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D68 from S2C, [Save to disk]
  • Re-refined 2d68 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2D68 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2D68
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2D68, from MSDmotif at EBI
  • Fold representative 2d68 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d68] [2d68_B] [2d68_A]
  • SWISS-PROT database: [O95684]
  • Domain organization of [FR1OP_HUMAN] by SWISSPFAM
  • Domain found in 2D68: [LisH ] by SMART
  • Other resources with information on 2D68
  • Community annotation for 2D68 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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