2D6F date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


C, D


Primary referenceStructural basis of RNA-dependent recruitment of glutamine to the genetic code., Oshikane H, Sheppard K, Fukai S, Nakamura Y, Ishitani R, Numata T, Sherrer RL, Feng L, Schmitt E, Panvert M, Blanquet S, Mechulam Y, Soll D, Nureki O, Science. 2006 Jun 30;312(5782):1950-4. PMID:16809540
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (358 Kb) [Save to disk]
  • Biological Unit Coordinates (2d6f.pdb1.gz) 351 Kb
  • LPC: Ligand-Protein Contacts for 2D6F
  • CSU: Contacts of Structural Units for 2D6F
  • Likely Quarternary Molecular Structure file(s) for 2D6F
  • Structure Factors (494 Kb)
  • Retrieve 2D6F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D6F from S2C, [Save to disk]
  • Re-refined 2d6f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2D6F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d6f_D] [2d6f_E] [2d6f_F] [2d6f] [2d6f_A] [2d6f_B] [2d6f_C]
  • SWISS-PROT database: [O26802] [O26803]
  • Domains found in 2D6F: [Asparaginase] [GatB_Yqey ] by SMART

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