- Asymmetric unit, PDB entry:
[header only] [complete with coordinates] (656 Kb) [Save to disk]
- CSU: Contacts of Structural Units for 2D8M
- Original NMR restraints
for 2D8M from PDB
- Retrieve 2D8M in mmCIF format [Save to disk]
- SEQRES to COORDINATES
correlation for 2D8M
[Save to disk]
|View 2D8M in 3D|
Proteopedia, because life has more than 2D.
- On Jmol, a nice Rasmol like molecule viewer.
This is good for easiest viewing of basic structure.
- On FirstGlance, an
excellent tool for a guided tour on the structure components, by
- On AstexViewer, from
- On RasMol
(Install RasMol freeware)
Here's help on
how to use RasMol.
|Visual 3D analysis of 2D8M|
representation from PDB Cartoon
plot from PDBSum
- Dipole moment, from Dipole Server at Weizmann Institute
- Crystal Contacts, from CryCo at Weizmann Institute
- 3D motif for 2D8M,
from MSDmotif at EBI
- Fold representative 2d8m from FSSP and Dali (Families of Structurally Similar Proteins)
- View one-letter amino acid or nucleotide sequence for each chain: [2d8m_A] [2d8m]
- SWISS-PROT database: [P18887]
- Domain organization of [XRCC1_HUMAN] by SWISSPFAM
- Domain found in 2D8M: [BRCT
] by SMART
- Alignments of the sequence of 2D8M with the sequences
similar proteins can be viewed for 2D8M's classification [XRCC1_HUMAN] at ProtoMap.
Click on "Neighbors List", then on the "See Alignments" button below the list.
- A sequence distance tree ("phylogenetic tree")
can be viewed for 1ACL's classification [XRCC1_HUMAN] at ProtoMap. Click on the Cluster number.
Other resources with information on 2D8M|
- Community annotation for 2D8M at PDBWiki (http://pdbwiki.org)
- MMDB (Entrez's Structure Database)
|Movements, Movies and Images|
from IMB Jena Image Library
of Biological Macromolecules.