2D8Q Metal Binding Protein date Dec 08, 2005
title Solution Structure Of The Mynd Domain Of The Human Zinc Fing Domain-Containing Protein 10
authors K.Miyamoto, T.Kigawa, T.Tomizawa, N.Tochio, A.Sasagawa, S.Koshiba S.Yokoyama, Riken Structural Genomicsproteomics Initiative
compound source
Molecule: Zinc Finger Mynd Domain Containing Protein 10
Chain: A
Fragment: Zf-Mynd
Synonym: Blu Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Zmynd10
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040816-10
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (341 Kb) [Save to disk]
  • Biological Unit Coordinates (2d8q.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 2D8Q
  • CSU: Contacts of Structural Units for 2D8Q
  • Retrieve 2D8Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D8Q from S2C, [Save to disk]
  • View 2D8Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2D8Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2D8Q, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d8q] [2d8q_A]
  • SWISS-PROT database: [O75800]
  • Domain organization of [ZMY10_HUMAN] by SWISSPFAM
  • Other resources with information on 2D8Q
  • Community annotation for 2D8Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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