2D92 Protein Binding date Dec 08, 2005
title Solution Structure Of The Fifth Pdz Domain Of Inad-Like Protein
authors K.Inoue, F.Hayashi, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Inad-Like Protein
Chain: A
Fragment: Pdz Domain
Synonym: Inadl Protein, Hinadl, Pals1-Associated Tight Junction Protein, Protein Associated To Tight Junctions;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Inadl, Patj
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050214-02
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (527 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2D92
  • Retrieve 2D92 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D92 from S2C, [Save to disk]
    • View 2D92 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2D92
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2D92, from MSDmotif at EBI
  • Fold representative 2d92 from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d92_A] [2d92]
  • SWISS-PROT database: [Q8NI35]
  • Domain organization of [INADL_HUMAN] by SWISSPFAM
  • Domain found in 2D92: [PDZ ] by SMART
    • Other resources with information on 2D92
  • Community annotation for 2D92 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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