2D9X Lipid Transport date Dec 13, 2005
title Solution Structure Of The Ph Domain Of Oxysterol Binding Pro Related Protein 11 From Human
authors H.Li, M.Sato, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Stru Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Oxysterol Binding Protein-Related Protein 11
Chain: A
Fragment: Ph Domain
Synonym: Osbp-Related Protein 11, Orp-11
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Osbpl11
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050404-14
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (614 Kb) [Save to disk]
  • Biological Unit Coordinates (2d9x.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 2D9X
  • Retrieve 2D9X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D9X from S2C, [Save to disk]
    • View 2D9X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2D9X
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2D9X, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d9x_A] [2d9x]
  • SWISS-PROT database: [Q9BXB4]
  • Domain organization of [OSB11_HUMAN] by SWISSPFAM
  • Domain found in 2D9X: [PH ] by SMART
    • Other resources with information on 2D9X
  • Community annotation for 2D9X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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