2DAH Solution Structure of the C-terminal UBA Domain in the Human Ubiquilin 3 date
authors Zhao, C., Kigawa, T., Sato, M., Koshiba, S., Inoue, M., Yokoyama, S., RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 20 Modelsresolution
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (256 Kb) [Save to disk]
  • Biological Unit Coordinates (2dah.pdb1.gz) 13 Kb
  • CSU: Contacts of Structural Units for 2DAH
  • Retrieve 2DAH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DAH from S2C, [Save to disk]
  • View 2DAH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DAH
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2DAH, from MSDmotif at EBI
  • Fold representative 2dah from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dah_A] [2dah]
  • SWISS-PROT database: [Q9H347]
  • Domain organization of [UBQL3_HUMAN] by SWISSPFAM
  • Domain found in 2DAH: [UBA ] by SMART
  • Other resources with information on 2DAH
  • Community annotation for 2DAH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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