2DAN Metal Binding Protein date Dec 14, 2005
title The Solution Structure Of The Mynd Domain (Leu384-Cys430) Of Zinc Finger Mynd Domain Containing Protein 10
authors A.Sasagawa, K.Miyamoto, N.Tochio, S.Koshiba, M.Inoue, T.Kigawa, S. Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Zinc Finger Mynd Domain Containing Protein 10
Chain: A
Fragment: Mynd Domain
Synonym: Blu Protein
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Zmynd10
Expression_system: Cell Free Synthesis
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050302-43
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (293 Kb) [Save to disk]
  • Biological Unit Coordinates (2dan.pdb1.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 2DAN
  • CSU: Contacts of Structural Units for 2DAN
  • Retrieve 2DAN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DAN from S2C, [Save to disk]
    • View 2DAN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2DAN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2DAN, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dan] [2dan_A]
  • SWISS-PROT database: [O75800]
  • Domain organization of [ZMY10_HUMAN] by SWISSPFAM
    • Other resources with information on 2DAN
  • Community annotation for 2DAN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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